PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.E4LG1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 308aa    MW: 35546.4 Da    PI: 4.3666
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.E4LG1genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.38.6e-094282348
                     -HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                     +W+ Ia +++ gRt++++k++w+++l
      Aradu.E4LG1  4 RWSVIAGHLP-GRTDNEIKNYWNSHL 28
                     5*********.************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129415.997132IPR017930Myb domain
SuperFamilySSF466891.09E-7333IPR009057Homeodomain-like
CDDcd001678.63E-6428No hitNo description
Gene3DG3DSA:1.10.10.601.7E-12429IPR009057Homeodomain-like
PfamPF002491.4E-6428IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MKLRWSVIAG HLPGRTDNEI KNYWNSHLRR KIYCFMRSLN ESLPPIDMAA LNEAASKRRA  60
APRRSSTIQE TNKTSLPKRE AITTSSQNCC NILGDHDHDD DDGKGISMMD AYFQMELGNN  120
NNPSSFMNNN NNGDFDEGLL GAYEWPDEEI MRLTQMFENG VLVNNNNNNN NIALKEEPNG  180
NYYYDDDECG QMIDMDMDLD MDVIGATRTT SEEEEEESKN HKNNNIAASI SEHNYWYNNN  240
NNDNSCSSSS VGDYHQWHDW DLAHQSNNNN NNHHQWDLST EDDQMLMMNS LWGTTTNEVN  300
NTTFHHYY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015959589.10.0PREDICTED: myb-related protein 330-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3134817
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47460.11e-13myb domain protein 12